https://doi.org/10.4081/aiua.2025.14129
Epidemiology and antimicrobial resistance of uropathogens in a tertiary care setting in Yemen: a retrospective study
All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.
Published: 30 September 2025
Background: Urinary tract infections (UTIs) are a major global health concern, particularly in resource-limited regions where antimicrobial resistance (AMR) is increasingly prevalent. This study aimed to describe the demographic characteristics, pathogen distribution, and antimicrobial resistance patterns among UTI patients, and to identify clinical predictors of multidrug-resistant (MDR) and extensively drug-resistant (XDR) infections.
Methods: A retrospective analysis was conducted on 216 clinically confirmed UTI cases processed at the Infectious Bacteriology and Biochemistry Laboratory affiliated with IBB University between January 2023 and September 2024. Data collected included patient demographics, clinical symptoms, comorbidities, bacterial isolates, and antimicrobial susceptibility profiles. MDR and XDR were classified according to internationally recognized definitions. Univariate and multivariate logistic regression analyses were performed to identify independent predictors of MDR/XDR infections.
Results: The majority of patients were adults aged 15-65 years (83.3%, n=180), with a slight male predominance (53.2%, n=115). Escherichia coli was the most frequently isolated pathogen (29.6%, n=64), followed by Staphylococcus aureus (19.0%, n=41) and Pseudomonas aeruginosa (6.0%, n=13). A substantial proportion of isolates exhibited MDR or XDR phenotypes (80.1%, n=173). Among E. coli isolates, resistance rates to ciprofloxacin and ceftriaxone exceeded 60%. Notably, all Klebsiella pneumoniae isolates were MDR (100%), and 92.3% of P. aeruginosa isolates were MDR. Nitrofurantoin and carbapenems demonstrated relatively higher susceptibility rates. Multivariate analysis identified prior hospitalization (adjusted odds ratio [aOR] = 3.15; 95% CI:1.50-6.60; p=0.002) and E. coli infection (aOR = 2.41; 95%CI: 1.02–5.70; p=0.04) as significant predictors of MDR/XDR infections.
Conclusions: The high prevalence of MDR and XDR uropathogens, particularly E. coli, underscores the urgent need for sustained antimicrobial resistance surveillance and stewardship programs in resource-limited settings. Identifying key clinical predictors can inform empirical treatment strategies, improve patient outcomes, and help contain the spread of resistant organisms.
Downloads
1. Mancuso G, Midiri A, Gerace E, et al. Urinary tract infections: the current scenario and future prospects. Pathogens 2023;12:623. DOI: https://doi.org/10.3390/pathogens12040623
2. Amiri F, Safiri S, Aletaha R, et al. Epidemiology of urinary tract infections in the Middle East and North Africa, 1990-2021. Trop Med Health. 2025; 53:16. DOI: https://doi.org/10.1186/s41182-025-00692-x
3. Fakhri-Demeshghieh A, Shokri A, Bokaie S. Antibiotic resistance of uropathogenic Escherichia coli (UPEC) among Iranian pediatrics: a systematic review and meta-analysis. Iran J Public Health 2024;53:508-23. DOI: https://doi.org/10.18502/ijph.v53i3.15133
4. Kapesa C, Mumbula EM, Kwenda HC. Prevalence of gram-negative bacterial causes of urinary tract infection and their antimicrobial susceptibility profile at the university teaching hospitals in Lusaka, Zambia. Sci Afr. 2025;27:e02558. DOI: https://doi.org/10.1016/j.sciaf.2025.e02558
5. Mouanga-Ndzime Y, Bisseye C, Longo-Pendy NM, et al. Trends in Escherichia coli and Klebsiella pneumoniae urinary tract infections and antibiotic resistance over a 5-year period in Southeastern Gabon. Antibiotics (Basel). 2024; 14:14. DOI: https://doi.org/10.3390/antibiotics14010014
6. Prestinaci F, Pezzotti P, Pantosti A. Antimicrobial resistance: a global multifaceted phenomenon. Pathog Glob Health. 2015;109:309-18. DOI: https://doi.org/10.1179/2047773215Y.0000000030
7. Magiorakos AP, Srinivasan A, Carey RB, et al. Multidrug-resistant, extensively drug-resistant and pandrug-resistant bacteria: an international expert proposal for interim standard definitions for acquired resistance. Clin Microbiol Infect. 2012; 18:268-81. DOI: https://doi.org/10.1111/j.1469-0691.2011.03570.x
8. Muteeb G, Kazi RNA, Aatif M, et al. Antimicrobial resistance: Linking molecular mechanisms to public health impact. SLAS Discov. 2025;33:100232. DOI: https://doi.org/10.1016/j.slasd.2025.100232
9. Alshakka M, Said K, Babakri M, et al. A study on antibiotics prescribing pattern at outpatient department in four hospitals in Aden-Yemen. J Pharm Pract Comm Med 2016;2:88-93. DOI: https://doi.org/10.5530/jppcm.2016.3.5
10. Badulla WFS, Alshakka M, Mohamed Ibrahim MI. Antimicrobial resistance profiles for different isolates in Aden, Yemen: a cross-sectional study in a resource-poor setting. Biomed Res Int. 2020;2020:1810290. DOI: https://doi.org/10.1155/2020/1810290
11. Delepierre A, Gayot A, Carpentier A. Update on counterfeit antibiotics worldwide; public health risks. Med Mal Infect. 2012;42:247-55. DOI: https://doi.org/10.1016/j.medmal.2012.04.007
12. Goldmann DA, Weinstein RA, Wenzel RP, et al. Strategies to prevent and control the emergence and spread of antimicrobial-resistant microorganisms in hospitals. A challenge to hospital leadership. JAMA 1996; 275:234-40. DOI: https://doi.org/10.1001/jama.1996.03530270074035
13. Sudsakorn S, Bahadduri P, Fretland J, Lu C. 2020 FDA Drugdrug interaction guidance: a comparison analysis and action plan by pharmaceutical industrial scientists. Curr Drug Metab. 2020;21:403-26. DOI: https://doi.org/10.2174/1389200221666200620210522
14. Cheesbrough M. District laboratory practice in tropical countries. 2 ed. Cambridge: Cambridge University Press; 2006. DOI: https://doi.org/10.1017/CBO9780511543470
15. Humphries R, Bobenchik AM, Hindler JA, Schuetz AN. Overview of changes to the clinical and laboratory standards institute performance standards for antimicrobial susceptibility testing, m100, 31st edition. J Clin Microbiol. 2021;59:e0021321. DOI: https://doi.org/10.1128/JCM.00213-21
16. Coque TM, Cantón R, Pérez-Cobas AE, et al. Antimicrobial resistance in the global health network: known unknowns and challenges for efficient responses in the 21st century. Microorganisms 2023;11:1050. DOI: https://doi.org/10.3390/microorganisms11041050
17. Aramalo SY, Akullo M, Oromcan BW. A cross-sectional prospective study on antimicrobial resistance profiles of common bacterial pathogens causing urinary tract infections among patients among patients at Mengo Hospital,Kampala district. Stud J Health Res Afr 2025;6:15.
18. Diriba A, Gizaw S, Alemu F, et al. Prevalence, antimicrobial sensitivity patterns and associated factors of urinary tract infection among patients attending Nekemte Comprehensive Specialized Hospital, Western Ethiopia, 2024: a cross-sectional study. BMC Infect Dis 2025; 25:474. DOI: https://doi.org/10.1186/s12879-025-10788-8
19. Que AT, Tran AD, Trang THN, et al. Epidemiology and antimicrobial resistance patterns of urinary tract infection: insights and strategies from a 5-year serial cross-sectional study in Vietnam. Ther Adv Infect Dis. 2025;12:20499361251315346. DOI: https://doi.org/10.1177/20499361251315346
20. Ngai PV, Dat TH, Nhi LY, et al. Distribution and antifungal susceptibility of Candida species causing vulvovaginal candidiasis and urinary tract infection in Medlatec healthcare system, Ha Noi city, Vietnam in 2023. Ther Adv Infect Dis. 2025;12:20499361241311465. DOI: https://doi.org/10.1177/20499361241311465
21. Farag PF, Albulushi HO, Eskembaji MH, et al. Prevalence and antibiotic resistance profile of UTI-causing uropathogenic bacteria in diabetics and non-diabetics at the Maternity and Children Hospital in Jeddah, Saudi Arabia. Front Microbiol. 2024; 15:1507505. DOI: https://doi.org/10.3389/fmicb.2024.1507505
22. Zhanel GG, Pozdirca M, Golden AR, et al. Sulopenem: an intravenous and oral penem for the treatment of urinary tract infections due to multidrug-resistant bacteria. Drugs. 2022;82:533-57. DOI: https://doi.org/10.1007/s40265-022-01688-1
23. Li J, Shi Y, Song X, et al. Mechanisms of antimicrobial resistance in Klebsiella: advances in detection methods and clinical implications. Infect Drug Resist. 2025; 18:1339-54. DOI: https://doi.org/10.2147/IDR.S509016
24. Pitout JD, Laupland KB. Extended-spectrum beta-lactamase producing Enterobacteriaceae: an emerging public-health concern. Lancet Infect Dis. 2008; 8:159-66. DOI: https://doi.org/10.1016/S1473-3099(08)70041-0
25. L B, Priya B, A E, P Shenoy R. Isolation and molecular characterization of multi-drug resistant uropathogenic Escherichia coli from urine samples: Insights into urinary tract infection management. Microbe 2024; 5:100185. DOI: https://doi.org/10.1016/j.microb.2024.100185
26. Mohanna MA, Raja'a YA. Frequency and treatment of urinary tract infection in children subjected to urine culture, in Sana'a, Yemen. J Ayub Med Coll Abbottabad 2005; 17:20-2.
27. Nasher MA, Nasher TM, Gunaid AA. Etiologies of the urinary tract infections in a Yemeni City. Saudi Med J 2001; 22:599-602.
28. Nakandi RM, Kakeeto P, Kihumuro RB, et al. Antibiotic susceptibility patterns of bacterial uropathogens at a private tertiary hospital in Uganda: a retrospective study. BMC Infect Dis 2025; 25:605. DOI: https://doi.org/10.1186/s12879-025-11005-2
29. Naidoo A, Kajee A, Mvelase NR, Swe-Han KS. Antimicrobial susceptibility of bacterial uropathogens in a South African regional hospital. Afr J Lab Med 2023; 12:1920. DOI: https://doi.org/10.4102/ajlm.v12i1.1920
30. Barré SL, Weeda ER, Matuskowitz AJ, Hall GA, Weant KA. Risk factors for antibiotic resistant urinary pathogens in patients discharged from the emergency department. Hosp Pharm 2022;57:462-8. DOI: https://doi.org/10.1177/00185787211046851
31. Rossignol L, Maugat S, Blake A, et al. Risk factors for resistance in urinary tract infections in women in general practice: A cross-sectional survey. J Infect 2015; 71:302-11. DOI: https://doi.org/10.1016/j.jinf.2015.05.012
32. Ku JH, Bruxvoort KJ, Salas SB, et al. Multidrug resistance of Escherichia coli from outpatient uncomplicated urinary tract infections in a large United States integrated healthcare organization. Open Forum Infect Dis. 2023; 10:ofad287. DOI: https://doi.org/10.1093/ofid/ofad287
33. Khanal N, Cortie CH, Story C, et al. Multidrug resistance in urinary E. coli higher in males compared to females. BMC Urol. 2024; 24:255. DOI: https://doi.org/10.1186/s12894-024-01654-x
34. Wright SW, Wrenn KD, Haynes M, Haas DW. Prevalence and risk factors for multidrug resistant uropathogens in ED patients. Am J Emerg Med. 2000; 18:143-6. DOI: https://doi.org/10.1016/S0735-6757(00)90005-6
35. Mohamed AH, Sheikh Omar NM, Osman MM, et al. Antimicrobial resistance and predisposing factors associated with catheter-associated UTI caused by uropathogens exhibiting multidrug-resistant patterns: A 3-year retrospective study at a tertiary hospital in Mogadishu, Somalia. Trop Med Infect Dis 2022;7:42. DOI: https://doi.org/10.3390/tropicalmed7030042
36. Alrasheedy M, Abousada HJ, Abdulhaq MM, et al. Prevalence of urinary tract infection in children in the kingdom of Saudi Arabia. Arch Ital Urol Androl 2021; 93:206-10. DOI: https://doi.org/10.4081/aiua.2021.2.206
How to Cite

This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.
PAGEPress has chosen to apply the Creative Commons Attribution NonCommercial 4.0 International License (CC BY-NC 4.0) to all manuscripts to be published.